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Setting a baseline for global urban virome surveillance in sewage
dc.creator | Nieuwenhuijse, D.F. | |
dc.creator | Oude Munnink, B.B. | |
dc.creator | Phan, M.V.T. | |
dc.creator | Hendriksen, R.S. | |
dc.creator | Bego, A. | |
dc.creator | Rees, C. | |
dc.creator | Neilson, E.H. | |
dc.creator | Coventry, K. | |
dc.creator | Collignon, P. | |
dc.creator | Allerberger, F. | |
dc.creator | Rahube, T.O. | |
dc.creator | Oliveira, G. | |
dc.creator | Ivanov, I. | |
dc.creator | Sopheak, T. | |
dc.creator | Vuthy, Y. | |
dc.creator | Yost, C.K. | |
dc.creator | Tabo, D.-A. | |
dc.creator | Cuadros-Orellana, S. | |
dc.creator | Ke, C. | |
dc.creator | Zheng, H. | |
dc.creator | Baisheng, L. | |
dc.creator | Jiao, X. | |
dc.creator | Donado-Godoy, P. | |
dc.creator | Coulibaly, K.J. | |
dc.creator | Hrenovic, J. | |
dc.creator | Jergović, M. | |
dc.creator | Karpíšková, R. | |
dc.creator | Elsborg, B. | |
dc.creator | Legesse, M. | |
dc.creator | Eguale, T. | |
dc.creator | Heikinheimo, A. | |
dc.creator | Villacis, J.E. | |
dc.creator | Sanneh, B. | |
dc.creator | Malania, L. | |
dc.creator | Nitsche, A. | |
dc.creator | Brinkmann, A. | |
dc.creator | Saba, C.K.S. | |
dc.creator | Kocsis, B. | |
dc.creator | Solymosi, N. | |
dc.creator | Thorsteinsdottir, T.R. | |
dc.creator | Hatha, A.M. | |
dc.creator | Alebouyeh, M. | |
dc.creator | Morris, D. | |
dc.creator | O’Connor, L. | |
dc.creator | Cormican, M. | |
dc.creator | Moran-Gilad, J. | |
dc.creator | Battisti, A. | |
dc.creator | Alba, P. | |
dc.creator | Shakenova, Z. | |
dc.creator | Kiiyukia, C. | |
dc.creator | Ng’eno, E. | |
dc.creator | Raka, L. | |
dc.creator | Bērziņš, A. | |
dc.creator | Avsejenko, J. | |
dc.creator | Bartkevics, V. | |
dc.creator | Penny, C. | |
dc.creator | Rajandas, H. | |
dc.creator | Parimannan, S. | |
dc.creator | Haber, M.V. | |
dc.creator | Pal, P. | |
dc.creator | Schmitt, H. | |
dc.creator | van Passel, M. | |
dc.creator | van de Schans, M.G.M. | |
dc.creator | Zuidema, T. | |
dc.creator | Jeunen, G.-J. | |
dc.creator | Gemmell, N. | |
dc.creator | Fashae, K. | |
dc.creator | Wester, A.L. | |
dc.creator | Holmstad, R. | |
dc.creator | Hasan, R. | |
dc.creator | Shakoor, S. | |
dc.creator | Rojas, M.L.Z. | |
dc.creator | Wasyl, D. | |
dc.creator | Bosevska, G. | |
dc.creator | Kochubovski, M. | |
dc.creator | Radu, C. | |
dc.creator | Gassama†, A. | |
dc.creator | Radosavljević, Vladimir | |
dc.creator | Tay, M.Y.F. | |
dc.creator | Zuniga-Montanez, R. | |
dc.creator | Wuertz, S. | |
dc.creator | Gavačová, D. | |
dc.creator | Trkov, M. | |
dc.creator | Keddy, K. | |
dc.creator | Esterhuyse, K. | |
dc.creator | Cerdà-Cuéllar, M. | |
dc.creator | Pathirage, S. | |
dc.creator | Larsson, D.G.J. | |
dc.creator | Norrgren, L. | |
dc.creator | Örn, S. | |
dc.creator | Van der Heijden, T. | |
dc.creator | Kumburu, H.H. | |
dc.creator | de RodaHusman, A.M. | |
dc.creator | Njanpop-Lafourcade, B.-M. | |
dc.creator | Bidjada, P. | |
dc.creator | Nikiema-Pessinaba, S.C. | |
dc.creator | Levent, B. | |
dc.creator | Meschke, J.S. | |
dc.creator | Beck, N.K. | |
dc.creator | Van Dang, C. | |
dc.creator | Tran, D.M.N. | |
dc.creator | Do Phuc, N. | |
dc.creator | Kwenda, G. | |
dc.creator | Munk, P. | |
dc.creator | Venkatakrishnan, S. | |
dc.creator | Aarestrup, F.M. | |
dc.creator | Cotten, M. | |
dc.creator | Koopmans, M.P.G. | |
dc.date.accessioned | 2021-02-04T12:06:09Z | |
dc.date.available | 2021-02-04T12:06:09Z | |
dc.date.issued | 2020 | |
dc.identifier.issn | 2045-2322 | |
dc.identifier.uri | https://vet-erinar.vet.bg.ac.rs/handle/123456789/1984 | |
dc.description.abstract | The rapid development of megacities, and their growing connectedness across the world is becoming a distinct driver for emerging disease outbreaks. Early detection of unusual disease emergence and spread should therefore include such cities as part of risk-based surveillance. A catch-all metagenomic sequencing approach of urban sewage could potentially provide an unbiased insight into the dynamics of viral pathogens circulating in a community irrespective of access to care, a potential which already has been proven for the surveillance of poliovirus. Here, we present a detailed characterization of sewage viromes from a snapshot of 81 high density urban areas across the globe, including in-depth assessment of potential biases, as a proof of concept for catch-all viral pathogen surveillance. We show the ability to detect a wide range of viruses and geographical and seasonal differences for specific viral groups. Our findings offer a cross-sectional baseline for further research in viral surveillance from urban sewage samples and place previous studies in a global perspective. | |
dc.publisher | Springer Nature | |
dc.rights | openAccess | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.source | Scientific Reports | |
dc.title | Setting a baseline for global urban virome surveillance in sewage | |
dc.type | article | en |
dc.rights.license | BY | |
dcterms.abstract | Рајандас, Х.; Париманнан, С.; Хабер, М.В.; Пал, П.; Сцхмитт, Х.; ван Пассел, М.; ван де Сцханс, М.Г.М.; Зуидема, Т.; Јеунен, Г.-Ј.; Геммелл, Н.; Фасхае, К.; Wестер, A.Л.; Холмстад, Р.; Хасан, Р.; Схакоор, С.; Ројас, М.Л.З.; Wасyл, Д.; Босевска, Г.; Коцхубовски, М.; Раду, Ц.; Гассама†, A.; Таy, М.Y.Ф.; Зунига-Монтанез, Р.; Wуертз, С.; Гавачовá, Д.; Трков, М.; Кеддy, К.; Естерхуyсе, К.; Цердà-Цуéллар, М.; Патхираге, С.; Ларссон, Д.Г.Ј.; Норргрен, Л.; Öрн, С.; Ван дер Хеијден, Т.; Кумбуру, Х.Х.; Aареструп, Ф.М.; Њанпоп-Лафоурцаде, Б.-М.; Бидјада, П.; Никиема-Пессинаба, С.Ц.; Левент, Б.; Месцхке, Ј.С.; Бецк, Н.К.; Ван Данг, Ц.; Тран, Д.М.Н.; До Пхуц, Н.; Кwенда, Г.; Мунк, П.; Венкатакрисхнан, С.; Цоттен, М.; Коопманс, М.П.Г.; Ниеуwенхуијсе, Д.Ф.; Оуде Муннинк, Б.Б.; Пхан, М.В.Т.; Хендриксен, Р.С.; Бего, A.; Реес, Ц.; Неилсон, Е.Х.; Цовентрy, К.; Цоллигнон, П.; Aллербергер, Ф.; Рахубе, Т.О.; Оливеира, Г.; Сопхеак, Т.; Вутхy, Y.; Yост, Ц.К.; Табо, Д.-A.; Цуадрос-Ореллана, С.; Ке, Ц.; Иванов, И.; Радосављевић, Владимир; де РодаХусман, A.М.; Зхенг, Х.; Баисхенг, Л.; Јиао, X.; Донадо-Годоy, П.; Цоулибалy, К.Ј.; Хреновиц, Ј.; Јерговић, М.; Карпíшковá, Р.; Елсборг, Б.; Легессе, М.; Егуале, Т.; Хеикинхеимо, A.; Виллацис, Ј.Е.; Саннех, Б.; Маланиа, Л.; Нитсцхе, A.; Бринкманн, A.; Саба, Ц.К.С.; Коцсис, Б.; Солyмоси, Н.; Тхорстеинсдоттир, Т.Р.; Хатха, A.М.; Aлебоуyех, М.; Моррис, Д.; О’Цоннор, Л.; Цормицан, М.; Моран-Гилад, Ј.; Баттисти, A.; Aлба, П.; Схакенова, З.; Кииyукиа, Ц.; Нг’ено, Е.; Рака, Л.; Бēрзиņш, A.; Aвсејенко, Ј.; Барткевицс, В.; Пеннy, Ц.; | |
dc.citation.volume | 10 | |
dc.citation.issue | 1 | |
dc.citation.rank | M21 | |
dc.identifier.wos | 000563547400026 | |
dc.identifier.doi | 10.1038/s41598-020-69869-0 | |
dc.identifier.scopus | 2-s2.0-85089383261 | |
dc.identifier.fulltext | https://vet-erinar.vet.bg.ac.rs/bitstream/id/5303/Setting_a_baseline_pub_2020.pdf | |
dc.type.version | publishedVersion |